One thing I know from my motorcycle days is that Honda spent lots of time tuning the air intakes of their motors to optimize the charge using the sound waves of the intake.
I would think that Honda decided for the NSX engine, that they would build a tuned intake system as well, so would guess there was research done on the design of the NSX intake.
Here in BC we get a lot of rain so the large Downforce type air scoops don't work well in the wet.
An air filter placed directly behind the side air intake as mentioned by dmscrx would get soaked and plugged with road dirt almost immediately.
The oem intake works well in all climate conditions but perhaps is a compromise and in sunny dry desert climes improvements can be made
Unless you are driving through the mod bogs of a tractor pull, the filters do not get clogged. The foam filters I use and the K&N filters I use are designed and oiled to prevent this very thing from happening. They even work on freaking dirt bikes in the messiest of races that have (big surprise) water. I would like to meet the NSX owner who drives in those conditions so I can skake his hand. NSXs and all other vehicles here in my area and even 1200 miles away will see suspended dirt particles in the intake charge and the occasional water droplets just like the factory airbox. A little more here and there is only going to warrant a sooner than later cleaning and oiling of the filter element. The customers do not care if they have to clean the filter every few years for some extra power..just like everyone else with a CAI that places the air filter closer to these dirty conditions.
Oems have been using resonant frequencies to tune intakes for a long time not just for power but for adding a good sound while eliminating the bad ones. Honda did not pull out all of the stops for the NSX intake box. The tech they have in F1 shows us of what they are capable. People are reading waay too much into this.
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